After running a sharepoint patch the configuration wizard would fail on one of the farm servers towards the end w/o any identifying information. These are some of the error messages that I received in the upgrade log(located: program files/common files/microsoft shared/web services../bin/logs):
Application Web Config for this IIS site (601773052) could not be found at C:\Inetpub\wwwroot\wss\VirtualDirectories\XXX\web.config.
[SPManager] [INFO] [1/24/2009 2:30:48 PM]: Resetting the status of PersistedUpgradableObject: SPWebApplication Name=WEBAPPLICATIONNAMEHERE Parent=SPWebService to Online.
[SPManager] [ERROR] [1/24/2009 2:30:48 PM]: ReflexiveUpgrade [SPWebApplication Name=WEBAPPLICATIONNAMEHERE Parent=SPWebService] failed.
Well thanks to MS KB944267
I was lead to look for the web.config file which did not exist on the problem farm server. I copied the files from the WFE- inetpub/wwwroot/virtualdirectories/WEBAPPLocation to the same directory on the farm server missing the files and that fixed the problem
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